Reversed axis on a AXYZ 6010 after installing DNC controller software...

Hi

I have been happily working on my 6010 for a while now and decided to start doing some 3d milling.
I bought cut3d and tried running the nc. files through the axyz dnc utility. After selecting the
correct port the program booted an os, which sent my spindle crashing into the bed.... :surprised:
After resetting the table all axis were reversed... up is down, x is y. I tried over writing the os with toolpath's
os, but still the same thing. I used f159 erase os, and resent it from toolpath, but still the same. The settings
on the calibration screen are all massive number x and y are 45000 mm ...

Any help much appreciated!

Thanks
Rich

Im thinking that the origin has changed from Origin 0 to Origin 1, this happens when the controller thinks its a miller or a foam cutting machine as opposed to a xy plane such as a router,